Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs7873784
rs7873784
0.020 GeneticVariation BEFREE We hypothesize that additional functional PU.1 site may increase TLR4 expression in individuals carrying minor C variant of rs7873784 and modulate the development of certain pathologies, such as rheumatoid arthritis and type-2 diabetes mellitus. 31785408

2020

dbSNP: rs1800796
rs1800796
0.010 GeneticVariation BEFREE Relationship between polymorphisms in -572G/C interleukin 6 promoter gene polymorphisms (rs1800796) and risk of rheumatoid arthritis: A meta-analysis. 31782615

2020

dbSNP: rs1143679
rs1143679
0.020 GeneticVariation BEFREE Interestingly, the GACC haplotype, which carries the ITGAM rs1143679 (A) minor allele, showed an association with protection against RA (OR = 0.14 and p = 3.0x10-4). 31774828

2019

dbSNP: rs6822844
rs6822844
0.770 GeneticVariation BEFREE Overall, the IL-21 rs6822844 G/T polymorphism was found to be significantly associated with decreased RA risk (eg: T-allel</span>e vs. G-allele: OR= 0.81, 95% CI= 0.72-0.91, P < 0.001). 31763680

2020

dbSNP: rs2518723
rs2518723
0.010 GeneticVariation BEFREE In addition, our results demonstrated that the rs944796 G allele, rs2518723 T allele, rs3217992 T allele frequencies were significantly associated with anti-CCP in RA patients (all <i>P</i> < 0.05). 31736958

2019

dbSNP: rs3217992
rs3217992
0.010 GeneticVariation BEFREE In addition, our results demonstrated that the rs944796 G allele, rs2518723 T allele, rs3217992 T allele frequencies were significantly associated with anti-CCP in RA patients (all <i>P</i> < 0.05). 31736958

2019

dbSNP: rs944796
rs944796
0.010 GeneticVariation BEFREE In addition, our results demonstrated that the rs944796 G allele, rs2518723 T allele, rs3217992 T allele frequencies were significantly associated with anti-CCP in RA patients (all <i>P</i> < 0.05). 31736958

2019

dbSNP: rs755622
rs755622
0.020 GeneticVariation BEFREE The aim of this study was to evaluate the association of MIF promoter polymorphisms (-794CATT<sub>5-8</sub> rs5844572 and -173G > C, rs755622), circulating MIF levels, and mRNA expression with RA susceptibility and disease activity. 31701681

2020

dbSNP: rs5844572
rs5844572
0.010 GeneticVariation BEFREE The aim of this study was to evaluate the association of MIF promoter polymorphisms (-794CATT<sub>5-8</sub> rs5844572 and -173G > C, rs755622), circulating MIF levels, and mRNA expression with RA susceptibility and disease activity. 31701681

2020

dbSNP: rs1689334
rs1689334
0.010 GeneticVariation BEFREE This study genotyped blood samples from 214 patients with rheumatoid arthritis (RA) and 293 healthy controls for single nucleotide polymorphisms (SNPs) rs2977537, rs2929970, rs2929973, rs2977530, rs1689334 and rs62514004. 31689765

2019

dbSNP: rs2929970
rs2929970
0.010 GeneticVariation BEFREE This study genotyped blood samples from 214 patients with rheumatoid arthritis (RA) and 293 healthy controls for single nucleotide polymorphisms (SNPs) rs2977537, rs2929970, rs2929973, rs2977530, rs1689334 and rs62514004. 31689765

2019

dbSNP: rs2929973
rs2929973
0.010 GeneticVariation BEFREE We showed that RA disease was more likely with the AA genotype compared with the AG genotype of SNP rs2977537 (adjusted odds ratio [AOR]: 0.54; 95% confidence interval [CI]: 0.34-0.84), and with the TT genotype (AOR: 0.24; 95% CI: 0.13-0.39) or the GG genotype (AOR: 0.05; 95% CI: 0.03-0.10) compared with the GT genotype of rs2929973, and with the AA genotype (AOR: 0.34; 95% CI: 0.22-0.54) or GG genotype (AOR: 0.52; 95% CI: 0.31 to 0.87) vs the AG genotype of rs2977530. 31689765

2019

dbSNP: rs2977530
rs2977530
0.010 GeneticVariation BEFREE We showed that RA disease was more likely with the AA genotype compared with the AG genotype of SNP rs2977537 (adjusted odds ratio [AOR]: 0.54; 95% confidence interval [CI]: 0.34-0.84), and with the TT genotype (AOR: 0.24; 95% CI: 0.13-0.39) or the GG genotype (AOR: 0.05; 95% CI: 0.03-0.10) compared with the GT genotype of rs2929973, and with the AA genotype (AOR: 0.34; 95% CI: 0.22-0.54) or GG genotype (AOR: 0.52; 95% CI: 0.31 to 0.87) vs the AG genotype of rs2977530. 31689765

2019

dbSNP: rs2977537
rs2977537
0.010 GeneticVariation BEFREE We showed that RA disease was more likely with the AA genotype compared with the AG genotype of SNP rs2977537 (adjusted odds ratio [AOR]: 0.54; 95% confidence interval [CI]: 0.34-0.84), and with the TT genotype (AOR: 0.24; 95% CI: 0.13-0.39) or the GG genotype (AOR: 0.05; 95% CI: 0.03-0.10) compared with the GT genotype of rs2929973, and with the AA genotype (AOR: 0.34; 95% CI: 0.22-0.54) or GG genotype (AOR: 0.52; 95% CI: 0.31 to 0.87) vs the AG genotype of rs2977530. 31689765

2019

dbSNP: rs62514004
rs62514004
0.010 GeneticVariation BEFREE This study genotyped blood samples from 214 patients with rheumatoid arthritis (RA) and 293 healthy controls for single nucleotide polymorphisms (SNPs) rs2977537, rs2929970, rs2929973, rs2977530, rs1689334 and rs62514004. 31689765

2019

dbSNP: rs2476601
rs2476601
1.000 GeneticVariation BEFREE Results showed that 1858 C/T PTPN22 SNP significantly (P =  0.007, OR = 2.321, 95% CI = 1.063-5.067) associated with RA. 31669381

2019

dbSNP: rs26232
rs26232
0.830 GeneticVariation BEFREE The rs26232 C allele, which has previously been associated with both the risk and severity of RA, is associated with greater invasive activity of RASFs in vitro, and with higher expression of ICAM-1 and IP-10. 31652652

2019

dbSNP: rs10106
rs10106
0.020 GeneticVariation BEFREE The aim of the study was to look for the association of FPGS 2752 G > A (rs1544105), FPGS 1994 A > G (rs10106), and GGH 452 C > T (rs 11545078), GGH -401C > T (rs 3758149) gene polymorphisms with methotrexate (MTX) treatment response and MTX-induced adverse events in South Indian Tamil patients with rheumatoid arthritis (RA). 31611592

2020

dbSNP: rs11545078
rs11545078
GGH
0.010 GeneticVariation BEFREE The aim of the study was to look for the association of FPGS 2752 G > A (rs1544105), FPGS 1994 A > G (rs10106), and GGH 452 C > T (rs 11545078), GGH -401C > T (rs 3758149) gene polymorphisms with methotrexate (MTX) treatment response and MTX-induced adverse events in South Indian Tamil patients with rheumatoid arthritis (RA). 31611592

2020

dbSNP: rs1348254052
rs1348254052
0.010 GeneticVariation BEFREE The aim of the study was to look for the association of FPGS 2752 G > A (rs1544105), FPGS 1994 A > G (rs10106), and GGH 452 C > T (rs 11545078), GGH -401C > T (rs 3758149) gene polymorphisms with methotrexate (MTX) treatment response and MTX-induced adverse events in South Indian Tamil patients with rheumatoid arthritis (RA). 31611592

2020

dbSNP: rs1544105
rs1544105
0.010 GeneticVariation BEFREE The aim of the study was to look for the association of FPGS 2752 G > A (rs1544105), FPGS 1994 A > G (rs10106), and GGH 452 C > T (rs 11545078), GGH -401C > T (rs 3758149) gene polymorphisms with methotrexate (MTX) treatment response and MTX-induced adverse events in South Indian Tamil patients with rheumatoid arthritis (RA). 31611592

2020

dbSNP: rs3763959
rs3763959
0.010 GeneticVariation BEFREE The AG genotype (rs3763959) has been associated with a higher presence of bone erosion in RA patients. 31600237

2019

dbSNP: rs4239242
rs4239242
0.010 GeneticVariation BEFREE The rs4239242</span> TT genotype showed a positive association with RA (p = 0.0032, odds ratio = 0.28), and heterozygous TC were prevalent in the control group compared to RA patients (p = 0.0001, odds ratio = 7.99). 31600237

2019

dbSNP: rs10088748
rs10088748
0.700 GeneticVariation GWASCAT Genetic associations with radiological damage in rheumatoid arthritis: Meta-analysis of seven genome-wide association studies of 2,775 cases. 31596875

2019

dbSNP: rs112112734
rs112112734
0.700 GeneticVariation GWASCAT Genetic associations with radiological damage in rheumatoid arthritis: Meta-analysis of seven genome-wide association studies of 2,775 cases. 31596875

2019